Beta Agarase References

• Allouch, J., Helbert, W., Henrissat, B., and Czjzek, M.: Parallel Substrate Binding Sites in a beta-Agarase Suggest a Novel Mode of Action on Double-Helical Agarose , Structure 12, 623, 2004
• Allouch, J., Jam, M., Helbert, W,, Barbeyron, T., Kloareg, B., Henrissat, B., and Czjzek, M.: The Three-Dimensional Structures of Two beta-Agarases , J Biol Chem 278, 47171, 2003
• Araki, C.: Acetylation of Agar Like Substance of Gelidium amansii, J Chem Soc 58, 1338, 1947
• Araki, T., and Lu, Z.: Optimization of Parameters for Iolation of Protoplasts from Gracilaria verrucosa (Rhodophyta) , J Mar Biotechnol 6, 193, 1998
• Belas R: Sequence Analysis of the agrA Gene Encoding beta-Agarase from Pseudomonas atlantica , J Bacteriol 171, 602, 1989
• Belas, R., Bartlett, D., and Silverman, M.: Cloning and Gene Replacement Mutagenesis of a Pseudomonas atlantica Agarase Gene , Appl Environ Microbiol 54, 30, 1988
• Chi, W., Chang, Y., and Hong, S.: Agar Degradation by Microorganisms and Agar-Degrading Enzymes , Appl Microbiol Biotechnol 94, 917, 2012
• Chi, W., Lee, C., Dugerjonjuu, S., Park, J., Kang, D., and Hong, S.: Biochemical Characterization of a Novel Iron-Dependent GH16 beta-Agarase, AgaH92, from an Agarolytic Bacterium Pseudoalteromonas Sp. H9 , FEMS Microbiol Lett e-pub ahead of , fnv035, 2015
• Day, D., and Yaphe, W.: Enzymatic Hydrolysis of Agar: Purification and Characterization of Neoagarobiose Hydrolase and p-Nitrophenyl alpha-Galactoside Hydrolase , Can J Microbiol 21, 1512, 1975
• Duckworth, M., and Turvey, J.: The Extracellular Agarase from a Cytophaga Species , Biochem J 109, 6P, 1968
• Duckworth, M., and Turvey, J.: The specificity of an Agarase from a Cytophaga Species , Biochem J 113, 693, 1969
• Fu, X., and Kim, S.: Agarase: Review of Major Sources, Categories, Purification Method, Enzyme Characteristics and Applications , Mar Drugs 8, 200, 2010
• Fu, X., Pan, C., Lin, H., and Kim, S.: Gene Cloning, Expression, and Characterization of a beta-Agarase, agaB34, from Agarivorans albus YKW-34 , J Microbiol Biotechnol 19, 257, 2009
• Gnirke, A., Huxley, C., Peterson, K., and Olson, M.: Microinjection of Intact 200- to 500-kb Fragments of YAC DNA into Mammalian Cells , Genomics 15, 659, 1993
• Groleau, D., and Yaphe, W.: Enzymatic Hydrolysis of Agar: Purification and Characterization of beta-Neoagarotetraose Hydrolase from Pseudomonas atlantic a , Can J Microbiol 23, 672, 1977
• Ha, J., Kim, G., Kim, S., Oh, T., Yu, J., and Kong, I.: beta-Agarase from Pseudomonas sp. W7: Purification of the Recombinant Enzyme from Escherichia coli and the Effects of Salt on its Activity , Biotechnol Appl Biochem 26 ( Pt 1), 1, 1997
• Hatada, Y., Ohta, Y., and Horikoshi, K.: Hyperproduction and Application of alpha-Agarase to Enzymatic Enhancement of Antioxidant Activity of Porphyran , J Agric Food Chem 54, 9895, 2006
• Hsu, P., Wei, C., Lu, W., Shen, F., Pan, C., and Lin, H.: Extracellular Production of a Novel Endo-beta-Agarase AgaA from Pseudomonas vesicularis MA103 that Cleaves Agarose into Neoagarotetraose and Neoagarohexaose , Int J Mol Sci 16, 5590, 2015
• Hu, Z., Lin, B., Xu, Y., Zhong, M., and Liu, G.: Production and Purification of Agarase From a Marine Agarolytic Bacterium Agarivorans sp. HZ105 , J Appl Microbiol 106, 181, 2009
• Humm, H.J.: Marine Agar Digesting Bacteria of the South Atlantic Coast, Duke Univ Marine Lab Bull Bull. No. 3, 45, 1946
• Ishimatsu, K., Kibesaki, Y., and Minamii, S.: Studies on the Agar Liquefying Bacteria. XVII. On the Mechanism of Enzymic Degradation of Agar, Schweiz Med Wschr 30, 137, 1956
• Kazlowski, B., Pan, C., and Ko, Y.: Separation and Quantification of Neoagaro- and Agaro-Oligosaccharide Products Generated From Agarose Digestion by beta-Agarase and HCl in Liquid Chromatography Systems , Carbohydr Res 343, 2443, 2008
• Kobayashi, R., Takisada, M., Suzuki, T., Kirimura, K., and Usami, S.: Neoagarobiose as a Novel Moisturizer with Whitening Effect , Biosci Biotechnol Biochem 61, 162, 1997
• Lee, M., Rhee, J., Cha, I., Song, E., Song, H., Yim, K., Seo, M., Choi, J., Choi, H., Yoon, C., Nam, Y., and Roh, S.: Draft Genome Sequence of the Agarolytic Haloarchaeon Halobellus rufus Type Strain CBA1103 , FEMS Microbiol Lett 362, 1, 2015
• Lee, Y., Lee, S., Park, G., Heo, S., Umasuthan, N., Kang, D., and Oh, C.: Draft Genome of Agar-Degrading Marine Bacterium Gilvimarinus agarilyticus JEA5 , Mar. Genomics e-pub ahead of, S1874, 2015
• Li, J., Han, F., Lu, X., Fu, X., Ma, C., Chu, Y., and Yu, W.: A Simple Method of Preparing Diverse Neoagaro-Oligosaccharides with beta-Agarase , Carbohydr Res 342, 1030, 2007
• Long, M., Yu, Z., and Xu, X.: A Novel beta-Agarase with High pH Stability from Marine Agarivorans sp. LQ48 , Mar Biotechnol (NY) Vol. 12,, , 62, 2010
• Malmqvist, M.: Purification and Characterization of Two Different Agarose-Degrading Enzymes , Biochim Biophys Acta 537, 31, 1978
• Michel, G., Nyval-Collen, P., Barbeyron, T., Czjzek, M., and Helbert, W.: Bioconversion of Red Seaweed Galactans: A Focus on Bacterial Agarases and Carrageenases , Appl Microbiol Biotechnol 71, 23, 2006
• Morrice, L., McLean, M., Long, W., and Williamson, F.: beta-Agarases I and II from Pseudomonas atlantica. Substrate specificities , Eur J Biochem 137, 149, 1983
• Morrice, L., McLean, M., Williamson, F., and Long, W.: beta-Agarases I and II from Pseudomonas atlantica. Purifications and Some Properties , Eur J Biochem 135, 553, 1983
• Oh, C., Nikapitiya, C., Lee, Y., Whang, I., Kim, S., Kang, D., and Lee, J.: Cloning, Purification and Biochemical Characterization of beta Agarase from the Marine Bacterium Pseudoalteromonas sp. AG4 , J Ind Microbiol Biotechnol 37, 483, 2010
• Ohta, Y., Hatada, Y., Nogi, Y., Miyazaki, M., Li, Z., Akita, M., Hidaka, Y., Goda, S., Ito, S., and Horikoshi, K.: Enzymatic Properties and Nucleotide and Amino Acid Sequences of a Thermostable beta-Agarase From a Novel Species of Deep-Sea Microbulbifer , Appl Microbiol Biotechnol 64, 505, 2004
• Ohta, Y., Nogi, Y., Miyazaki, M., Li, Z., Hatada, Y., Ito, S., and Horikoshi, K.: Enzymatic Properties and Nucleotide and Amino Acid Sequences of a Thermostable beta-Agarase From the Novel Marine Isolate, JAMB-A94 , Biosci Biotechnol Biochem 68, 1073, 2004
• Pluvinage, B., Hehemann, J., and Boraston, A.: Substrate Recognition and Hydrolysis by a Family 50 Exo-beta-Agarase, Aga50D, from the Marine Bacterium Saccharophagus degradans , J Biol Chem 288, 28078, 2013
• Schroeder, D., Jaffer, M., and Coyne, V.: Investigation of the Role of a beta(1-4) Agarase Produced by Pseudoalteromonas gracilis B9 in Eliciting Disease Symptoms in the Red Alga Gracilaria gracilis , Microbiology 149, 2919, 2003
• Takagi, E., Hatada, Y., Akita, M., Ohta, Y., Yokoi, G., Miyazaki, T., Nishikawa, A., and Tonozuka, T.: Crystal Structure of the Catalytic Domain of a GH16 beta-Agarase from a Deep-Sea Bacterium, Microbulbifer thermotolerans JAMB-A94 , Biosci Biotechnol Biochem e-pub ahead of , 1, 2014
• Takahashi, R., Ito, K., Fujiwara, Y., Kodaira, K., Kodaira, K., Hirabayashi, M., and Ueda, M.: Generation of Transgenic Rats with YACs and BACs: Preparation Procedures and Integrity of Microinjected DNA , Exp Anim 49, 229, 2000
• Tellez, C., and Cole, K.: Preparative Electrochromatography of Proteins in Various Types of Porous Media , Electrophoresis 21, 1001, 2000
• Van der Meulen, H., and Harder, W.: Production and Characterization of the Agarase of Cytoplaga flevensis , Antonie Van Leeuwenhoek 41, 431, 1975
• Xie, W., Lin, B., Zhou, Z., Lu, G., Lun, J., Xia, C., Li, S., and Hu, Z.: Characterization of a Novel beta-Agarase from an Agar-Degrading Bacterium Catenovulum sp. X3 , Appl Microbiol Biotechnol 97, 4907, 2013
• Yaphe, W.: Proceedings of 5th International Seaweed Symposium,(Young, E., and McLachlan, J., Eds.), Pergamon Press, Oxford, 333, 1966
• Yaphe, W.: The Use of Agarase from Pseudomonas atlantica in the Identification of Agar in Marine Algae (Rhodophyceae) , Can J Microbiol 3, 987, 1957
• Yu, R., Graf, J., and Smets, B.: An Improved Cell Recovery Method for Iron Oxidizing Bacterial (IOB) Enrichments , J Microbiol Methods 72, 235, 2008

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